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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015793787.1_cds_XP_016435392.1_3049
CDS Infomation

[gene=LOC107761657] [db_xref=GeneID:107761657] [protein=aspartyl protease family protein At5g10770-like] [protein_id=XP_016435392.1] [location=complement(join(17876..19191,21882..22074))] [gbkey=CDS]
Sequence

ATGGAACATTCACTAATGTCCACTGGAAGTTACTTTTTGCTCTTCTCTTCTTCTGCGTTT
CTTCTCATTTTGCTTTCATTCTCTGTGGAGAAAAGCCATGCTTTGGAAACAAGAGAAACC
ATTGAATCCCATTTCCACACTCTCCAACTCAGCTCTCTGCTTCCTTCCTCTTCTTGCAAC
CCTGCAACCAAAGGTAAAAGAAGAGGGGCATCATTGGAGGTCGTCAACAGGCAAGGCCCG
TGTACCTTACTCAACCAAAAGGGAGCAAAAGCCCCAACTCTGACCGAAATCTTAGCCCAC
GATCAAGCCCGAGTGGACTCAATCCAAGCCCGCATCACAGACCAAAGCTACGACCTCTTC
AAGAAAAAAGACAAAAAATCTTCCAACAAGAAGAAGAGCGTAAAAGACTCAAAAGCCAAT
CTCCCTGCACAATCCGGCCTTCCTCTCGGTACCGGAAACTACATCGTCAACGTCGGACTT
GGAACTCCAAAAAAAGACCTTTCCCTCATTTTTGACACTGGTAGTGACCTCACTTGGACT
CAATGCCAACCTTGTGTCAAATCCTGCTATGCTCAACAGCAACCAATTTTCGACCCATCA
ACTTCAAAAACATATTCCAACATTTCGTGCACTTCCGCTGCTTGTTCTAGTCTCAAATCA
GCTACTGGAAACAGCCCAGGTTGTTCTTCCTCTAATTGCGTTTACGGGATTCAGTACGGT
GATTCCTCATTCACAATTGGGTTTTTTGCTAAGGATAAATTAACCTTAACACAAAATGAT
GTGTTTGATGGGTTCATGTTCGGTTGTGGGCAAAACAACAAGGGATTATTCGGAAAAACT
GCTGGATTAATCGGTTTAGGCCGCGATCCACTCTCCATTGTTCAACAAACAGCTCAGAAA
TTCGGAAAATACTTCTCTTACTGCCTTCCCACATCCCGGGGGTCAAATGGTCATTTAACA
TTCGGCAACGGTAACGGGGTAAAAGCTTCAAAAGCAGTAAAAAACGGCATCACGTTCACG
CCGTTTGCTTCGTCACAAGGGACGGCATATTACTTCATTGACGTACTCGGTATTTCCGTC
GGTGGAAAAGCTTTATCGATAAGTCCGATGTTGTTCCAGAACGCCGGAACGATTATAGAT
TCCGGTACGGTGATTACACGGTTGCCGTCGACGGCGTACGGCAGTCTGAAGTCAGCTTTC
AAGCAGTTCATGTCGAAATATCCCACGGCGCCGGCTCTTTCTTTGCTGGACACTTGCTAT
GATTTAAGCAATTATACTTCCATTAGTATTCCGAAGATCAGCTTCAACTTCAACGGCAAT
GCGAATGTGGAATTGGACCCGAATGGTATTCTTATAACAAACGGTGCATCTCAGGTTTGT
TTGGCTTTTGCTGGAAATGGAGATGATGATAGTATTGGGATTTTTGGGAATATACAACAA
CAGACATTGGAGGTAGTATATGATGTTGCTGGTGGGCAATTAGGGTTTGGTTATAAGGGA
TGTTCTTAA

Peptide Sequence

PEP ID

XP_016435392.1
PEP Infomation

PREDICTED: aspartyl protease family protein At5g10770-like [Nicotiana tabacum]
Sequence

MEHSLMSTGSYFLLFSSSAFLLILLSFSVEKSHALETRETIESHFHTLQLSSLLPSSSCN
PATKGKRRGASLEVVNRQGPCTLLNQKGAKAPTLTEILAHDQARVDSIQARITDQSYDLF
KKKDKKSSNKKKSVKDSKANLPAQSGLPLGTGNYIVNVGLGTPKKDLSLIFDTGSDLTWT
QCQPCVKSCYAQQQPIFDPSTSKTYSNISCTSAACSSLKSATGNSPGCSSSNCVYGIQYG
DSSFTIGFFAKDKLTLTQNDVFDGFMFGCGQNNKGLFGKTAGLIGLGRDPLSIVQQTAQK
FGKYFSYCLPTSRGSNGHLTFGNGNGVKASKAVKNGITFTPFASSQGTAYYFIDVLGISV
GGKALSISPMLFQNAGTIIDSGTVITRLPSTAYGSLKSAFKQFMSKYPTAPALSLLDTCY
DLSNYTSISIPKISFNFNGNANVELDPNGILITNGASQVCLAFAGNGDDDSIGIFGNIQQ
QTLEVVYDVAGGQLGFGYKGCS

Transcript Sequence

Gene sequence data has not been registered.